Search result

BaseInfo

ncRNA ID	gma-miR5782
Species	Glycine max
Class	miRNA
Genome position	chr7:12691799-12691939 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	111 - UAGCUGGUAGGAGAAGUUCAG - 131
Stem-loop(if miRNA)	G     U                   A           AC        AUAAUUUUC    AAACUCUAUCCU  GUAAA UGAAUUGAACUUCUCCUAU AGUUAAAAUCA  UUAUACAC         GUAG            A  ||||| ||||||||||||||||||| |||||||||||  ||||||||         ||||            U  CAUUU ACUUGACUUGAAGAGGAUG UCGAUUUUAGU  AAUGUGUG         GUCG            A -     U                   G           CC        -------AA    AAAACUUCUUCG
Stem-loop sequence	GGUAAAUUGAAUUGAACUUCUCCUAUAAGUUAAAAUCAACUUAUACACAUAAUUUUCGUAGAAACUCUAUCCUAUAGCUUCUUCAAAAGCUGAAGUGUGUAACCUGAUUUUAGCUGGUAGGAGAAGUUCAGUUCAUUUUAC

Reference

1

PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011).