ncRNA ID | gma-miR4369 |
Species | Glycine max |
Class | miRNA |
Genome position | chr7:11673209-11673287 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 53 - GGAUCAAGCUGAUCCGGAAGUGGA - 76 |
Stem-loop(if miRNA) |
U     U           A         ---GAA  GA U  UUUCC CUUUCGGAUCA CUUGAUCCG      GA  C U  ||||| ||||||||||| |||||||||      ||  |  AAAGG GAAGGCCUAGU GAACUAGGC      CU  G A A     U           C         AUUCAA  AG C |
Stem-loop sequence | UUUUCCUCUUUCGGAUCAACUUGAUCCGGAAGAGACUUACGGAUCAACUUACGGAUCAAGCUGAUCCGGAAGUGGAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006600975.2 |
|
2.5 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |