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BaseInfo

ncRNA ID gma-miR159e-5p
Species Glycine max
Class miRNA
Genome position chr7:9524917-9525127 [-]
Reference genome v1.0
Source miRBase
Length 20
Mature sequence(if miRNA) 173 - GAGCUCCUUGAAGUCCAAUU - 192
Stem-loop(if miRNA) -         -UUAU  A            GA       UU      CU    ----   UG   U     G     C      UC      UU     -  UCAUUA
 CAAAGGGGG     GG GUGGAGCUCCUU  AGUCCAA  GAGGAU  UACU    GGG  GAU GAGCU CUUAG UAUGGA  CCACAG  CUACC CA      A
 |||||||||     || ||||||||||||  |||||||  ||||||  ||||    |||  ||| ||||| ||||| ||||||  ||||||  ||||| ||
 GUUUUCCCC     CC CAUCUCGAGGGA  UUAGGUU  UUCCUA  AUGA    UCC  UUA UUCGA GGGUC AUACCU  GGUGUU  GAUGG GU      G
U         UCUUC  A            AG       UC      UU    UAUU   GU   C     G     U      UC      CU     U  UUUCGU
Stem-loop sequence CAAAGGGGGUUAUGGAGUGGAGCUCCUUGAAGUCCAAUUGAGGAUCUUACUGGGUGGAUUGAGCUGCUUAGCUAUGGAUCCCACAGUUCUACCCAUCAUUAAGUGCUUUUGUGGUAGUCUUGUGGCUUCCAUAUCUGGGGAGCUUCAUUUGCCUUUAUAGUAUUAUCCUUCUUUGGAUUGAAGGGAGCUCUACACCCUUCUCCCCUUUUGU

Reference

1 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).