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BaseInfo

ncRNA ID	gma-miR156ab
Species	Glycine max
Class	miRNA
Genome position	chr7:5376509-5376696 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	160 - AUUUAAGUGAUGGGAGCUCCG - 180
Stem-loop(if miRNA)	UCAAAC  AA            -      C  U  UG  C    ---------------AU  U  GAAACCUCUGCUGCUAAUUCGUGGAUACCUCUGGUUC       AC  GCUGGAGCUCUC UCACUU AA UA  AG GGAU                 GA GG                                     C       ||  |||||||||||| |||||| || ||  || ||||                 || ||                                     G       UG  UGGCCUCGAGGG AGUGAA UU AU  UU UCUA                 GA GG                                     U ----UA  GG            U      -  U  GU  U    GUUCCAUUAUUGAAGUA  G  UUAAGUACGUUUGGGAACUGAAGCUUGCAUACAACAA
Stem-loop sequence	UCAAACACAAGCUGGAGCUCUCUCACUUCAAUUAUGAGCGGAUAUGAUGGGAAACCUCUGCUGCUAAUUCGUGGAUACCUCUGGUUCCGUAACAACAUACGUUCGAAGUCAAGGGUUUGCAUGAAUUGGGAGAUGAAGUUAUUACCUUGAUCUUUUUGUAUUUAAGUGAUGGGAGCUCCGGUGGGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT098524.1	ncRNA:21   GCCUCGAGGGUAGUGAAUUUA   1   *||||||=||*|||||||||| targets:619   GGGAGCUUCCUUCACUUAAAU   639 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26N17 unknown mRNA	NA	coding protein	psRNATarget
XM_003554023.3	ncRNA:21   GCCUCGAGGGUAGUGAAUUUA   1   *||||||=||*|||||||||| targets:669   GGGAGCUUCCUUCACUUAAAU   689 Target Full Sequence	2.5	PREDICTED: Glycine max ELMO domain-containing protein A (LOC100777764), transcript variant X1, mRNA	ELMO domain-containing protein A(LOC100777764)	coding protein	psRNATarget
XM_014771539.1	ncRNA:21   GCCUCGAGGGUAGUGAAUUUA   1   *||||||=||*|||||||||| targets:766   GGGAGCUUCCUUCACUUAAAU   786 Target Full Sequence	2.5	PREDICTED: Glycine max ELMO domain-containing protein A (LOC100777764), transcript variant X4, mRNA	ELMO domain-containing protein A(LOC100777764)	coding protein	psRNATarget
XM_006604220.2	ncRNA:21   GCCUCGAGGGUAGUGAAUUUA   1   *||||||=||*|||||||||| targets:774   GGGAGCUUCCUUCACUUAAAU   794 Target Full Sequence	2.5	PREDICTED: Glycine max ELMO domain-containing protein A (LOC100777764), transcript variant X2, mRNA	ELMO domain-containing protein A(LOC100777764)	coding protein	psRNATarget
XM_014771540.1	ncRNA:21   GCCUCGAGGGUAGUGAAUUUA   1   *||||||=||*|||||||||| targets:791   GGGAGCUUCCUUCACUUAAAU   811 Target Full Sequence	2.5	PREDICTED: Glycine max ELMO domain-containing protein A (LOC100777764), transcript variant X5, mRNA	ELMO domain-containing protein A(LOC100777764)	coding protein	psRNATarget
XM_014771538.1	ncRNA:21   GCCUCGAGGGUAGUGAAUUUA   1   *||||||=||*|||||||||| targets:799   GGGAGCUUCCUUCACUUAAAU   819 Target Full Sequence	2.5	PREDICTED: Glycine max ELMO domain-containing protein A (LOC100777764), transcript variant X3, mRNA	ELMO domain-containing protein A(LOC100777764)	coding protein	psRNATarget
XM_014770645.1	ncRNA:21   GCCUCGAGGGUAGUGAAUUUA   1   **||*=||||||||||||||* targets:449   GUGAUUUCCCAUCACUUAAAA   469 Target Full Sequence	3.0	PREDICTED: Glycine max F-box protein At4g09920-like (LOC102661539), mRNA	F-box protein At4g09920-like(LOC102661539)	coding protein	psRNATarget

Reference

1	PMID:22559273 "Genome organization and characteristics of soybean microRNAs"; Turner M, Yu O, Subramanian S; BMC Genomics. 13:169(2012).