Search result

BaseInfo

ncRNA ID gma-miR4387b
Species Glycine max
Class miRNA
Genome position chr7:4943633-4943744 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 81 - AAGGUGUGAUGGCAUGACACUCUG - 104
Stem-loop(if miRNA)                            GU   ---     AUCAUUCAAGGUGUUG
GUGACAGGCAGAGUGUCAUGUCAUCAU  CUU   GCCAC                G
|||||||||||||||||||||||||||  |||   |||||                U
CACUGUCUGUCUCACAGUACGGUAGUG  GAA   UACUU                G
                           UG   UAG     GUAGUAAAGUAACGGU
Stem-loop sequence GUGACAGGCAGAGUGUCAUGUCAUCAUGUCUUGCCACAUCAUUCAAGGUGUUGGUGUGGCAAUGAAAUGAUGUUCAUGAUAAGGUGUGAUGGCAUGACACUCUGUCUGUCAC

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).