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BaseInfo

ncRNA ID gma-miR166c-5p
Species Glycine max
Class miRNA
Genome position chr7:4453653-4453782 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 94 - GGAAUGUUGUCUGGCUCGAGG - 114
Stem-loop(if miRNA) GCUU    UU   A        UU      CU       C  -UCUUC         --UU      A
    UGUG  UUG GGGGAAUG  GUCUGG  CGAGGAC CU      UUCUUGAUC    GUGUAG C
    ||||  ||| ||||||||  ||||||  ||||||| ||      |||||||||    ||||||
    AUAU  AAC CCCCUUAC  CGGACC  GCUUUUG GA      AGGAACUGG    CAUAUC U
----    -U   C        UU      AG       U  UUCGUA         UGUC      G
Stem-loop sequence GCUUUGUGUUUUGAGGGGAAUGUUGUCUGGCUCGAGGACCCUUCUUCUUCUUGAUCUUGUGUAGACUGCUAUACCUGUGGUCAAGGAAUGCUUAGUGUUUUCGGACCAGGCUUCAUUCCCCCCAAUUAUA

Reference

1 PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean";
Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL;
J Exp Bot. 62:2495-2506(2011).
2 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).