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BaseInfo

ncRNA ID	gma-miR5035-3p
Species	Glycine max
Class	miRNA
Genome position	chr7:1939800-1939950 [+]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	118 - UGUUUAGAAGCUCAUAGAAUAGAU - 141
Stem-loop(if miRNA)	A    CU    CUUGUCUACUGAAAAUCAUAUAAACAUAUGUACCUACCUAUCCUAUGAGCUUCUAAACAUUUUUU  UCAG  UAGG                                                                 C  ||||  ||||  UAUA  CAUG                                                                 C -    --    GAUAGAUAAGAUACUCGAAGAUUUGUAAAAAAGGGAGUACGGUUUCUACAAAAGAAACCGUAUUC
Stem-loop sequence	AUCAGCUUAGGCUUGUCUACUGAAAAUCAUAUAAACAUAUGUACCUACCUAUCCUAUGAGCUUCUAAACAUUUUUUCCCUUAUGCCAAAGAAAACAUCUUUGGCAUGAGGGAAAAAAUGUUUAGAAGCUCAUAGAAUAGAUAGGUACAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006596634.1	ncRNA:24   UAGAUAAGAUACUCGAAGAUUUGU   1   ||**|||=|||||||||||||||= targets:413   AUGAAUUUUAUGAGCUUCUAAACG   436 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100794856 (LOC100794856), mRNA	uncharacterized LOC100794856(LOC100794856)	coding protein	psRNATarget
XM_003539827.3	ncRNA:24   UAGAUAAGAUACUCGAAGAUUUGU   1   *|||-||||=|||||||||*|||| targets:125   CUCU-UUCUGUGAGCUUCUCAACA   147 Target Full Sequence	2.5	PREDICTED: Glycine max serine carboxypeptidase-like 40 (LOC100783864), mRNA	serine carboxypeptidase-like 40(LOC100783864)	coding protein	psRNATarget
XM_003534335.2	ncRNA:24   UAGAUAAGAUACUCGAAGAUUUGU   1   *|||-||||=|||||||||*|||| targets:196   CUCU-UUCUGUGAGCUUCUCAACA   218 Target Full Sequence	2.5	PREDICTED: Glycine max serine carboxypeptidase-like 40 (LOC100804815), mRNA	serine carboxypeptidase-like 40(LOC100804815)	coding protein	psRNATarget

Reference

1	PMID:21751852 "Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011).
2	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).