| ncRNA ID | gma-miR4379 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr7:1501189-1501272 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 60 - UAGAGUGUAUACUGUGAGAGGCCU - 83 |
| Stem-loop(if miRNA) |
U CU A CUAA A CAAA C UAGAGUGUAUA GUGAG GGC CUCA CCC AG U ||||||||||| ||||| ||| |||| ||| || AUCUUAUAUAU UAUUC CCG GAGU GGG UC A A -U C UUGG A -AAC A |
| Stem-loop sequence | UUAGAGUGUAUACUGUGAGAGGCCUAACUCAACCCCAAAAGCUAACUCAAGGGAUGAGGGUUGCCCCUUAUUUAUAUAUUCUAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006572896.2 |
|
1.5 | PREDICTED: Glycine max alpha/beta hydrolase domain-containing protein 17B-like (LOC100814433), transcript variant X4, mRNA | alpha/beta hydrolase domain-containing protein 17B-like(LOC100814433) | coding protein | psRNATarget | |||||||||
| XM_006572894.2 |
|
1.5 | PREDICTED: Glycine max alpha/beta hydrolase domain-containing protein 17B-like (LOC100814433), transcript variant X2, mRNA | alpha/beta hydrolase domain-containing protein 17B-like(LOC100814433) | coding protein | psRNATarget | |||||||||
| XM_006572893.2 |
|
1.5 | PREDICTED: Glycine max alpha/beta hydrolase domain-containing protein 17B-like (LOC100814433), transcript variant X1, mRNA | alpha/beta hydrolase domain-containing protein 17B-like(LOC100814433) | coding protein | psRNATarget | |||||||||
| XM_006587545.2 |
|
2.5 | PREDICTED: Glycine max alpha/beta hydrolase domain-containing protein 17B-like (LOC100813362), mRNA | alpha/beta hydrolase domain-containing protein 17B-like(LOC100813362) | coding protein | psRNATarget |
| 1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |