ncRNA ID | gma-miR5778 |
Species | Glycine max |
Class | miRNA |
Genome position | chr6:47266922-47267044 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 11 - CGACGAACUCUUCGUCGGCAUC - 32 |
Stem-loop(if miRNA) |
GCA   A         AC          CAUC              UGU          UUG    UCA CUUCGACGA  UCUUCGUCGG    GACAUCCACGGAGA   CUUGCCGGAC   G    ||| |||||||||  ||||||||||    ||||||||||||||   ||||||||||    AGU GAGGCUGCU  AGGAGCGGCC    CUGUAGGUGCCUCU   GAGCGGCUUG   A UCA   A         -A          ACGA              --U          UAG |
Stem-loop sequence | GCAUCAACUUCGACGAACUCUUCGUCGGCAUCGACAUCCACGGAGAUGUCUUGCCGGACUUGGAGAUGUUCGGCGAGUUCUCCGUGGAUGUCAGCACCGGCGAGGAAUCGUCGGAGAUGAACU |
1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |