ncRNA ID | gma-miR166l |
Species | Glycine max |
Class | miRNA |
Genome position | chr6:45110922-45111100 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 134 - GGAAUGUUGUCUGGCUCGAGG - 154 |
Stem-loop(if miRNA) |
---UUUCCUU        GA  U  A A      UU      -    AG    ----------------   ----      AGAG     AGAUGAGUGAA           GCAAAGGU  GG UG G GGAAUG  GUCUGG CUCG  GUCA                UGG    AGGAGG    UACUC           A           ||||||||  || || | ||||||  |||||| ||||  ||||                |||    ||||||    |||||           UGUUUUCA  CC AC C CUUUAC  CGGACC GGGU  UAGU                ACC    UUCUCC    UUUAA           G CCUUAUUUUU        -A  U  C C      UU      A    CU    UAAAAAAAAAAAAAAA   ACAA      --CA     AGGUAACCUUU |
Stem-loop sequence | UUUCCUUGCAAAGGUGAGGUUGAGAGGAAUGUUGUCUGGCUCGAGGUCAUGGAGGAGGAGAGUACUCAGAUGAGUGAAAGUUUCCAAUGGAAAUUUACCCUCUUAACACCAAAAAAAAAAAAAAAAUUGAUUCUGGGACCAGGCUUCAUUUCCCCCAUCCAACUUUUGUUUUUUAUUCC |
1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |