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BaseInfo

ncRNA ID gma-miR166l
Species Glycine max
Class miRNA
Genome position chr6:45110922-45111100 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 134 - GGAAUGUUGUCUGGCUCGAGG - 154
Stem-loop(if miRNA) ---UUUCCUU        GA  U  A A      UU      -    AG    ----------------   ----      AGAG     AGAUGAGUGAA
          GCAAAGGU  GG UG G GGAAUG  GUCUGG CUCG  GUCA                UGG    AGGAGG    UACUC           A
          ||||||||  || || | ||||||  |||||| ||||  ||||                |||    ||||||    |||||
          UGUUUUCA  CC AC C CUUUAC  CGGACC GGGU  UAGU                ACC    UUCUCC    UUUAA           G
CCUUAUUUUU        -A  U  C C      UU      A    CU    UAAAAAAAAAAAAAAA   ACAA      --CA     AGGUAACCUUU
Stem-loop sequence UUUCCUUGCAAAGGUGAGGUUGAGAGGAAUGUUGUCUGGCUCGAGGUCAUGGAGGAGGAGAGUACUCAGAUGAGUGAAAGUUUCCAAUGGAAAUUUACCCUCUUAACACCAAAAAAAAAAAAAAAAUUGAUUCUGGGACCAGGCUUCAUUUCCCCCAUCCAACUUUUGUUUUUUAUUCC

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).