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BaseInfo

ncRNA ID gma-miR1534
Species Glycine max
Class miRNA
Genome position chr6:36715819-36716061 [-]
Reference genome v1.0
Source miRBase
Length 20
Mature sequence(if miRNA) 214 - UAUUUUGGGUAAAUAGUCAU - 233
Stem-loop(if miRNA) -- A       A      ---                 CA   C                   C         CU  --   G  --  A   AGGCUUUUUCAUUAACGGUAACAAAUGGACAGAUU
  G UUAAAUU UAUUUU   GGGUAAAUAGUCAUUUU  UCC UGAAUGUGUAGAGCGCUAA AAAUUCGUC  UA  AAU UG  UC CAU                                   U
  | ||||||| ||||||   |||||||||||||||||  ||| ||||||||||||||||||| |||||||||  ||  ||| ||  || |||
  C GGUUUGA AUAAAA   CCCAUUUAUUAGUAAAA  AGG ACUUACACGUCUCGUGAUU UUUAAGCAG  AG  UUU CU  UU UUA                                   G
UA -       -      UUU                 AC   A                   A         --  GC   -  AU  -   AGUUUAAAAUCAGAGAUUUUCACUUUUUUUACGCU
Stem-loop sequence GAUUAAAUUAUAUUUUGGGUAAAUAGUCAUUUUCAUCCCUGAAUGUGUAGAGCGCUAACAAAUUCGUCCUUAAAUGUGUCACAUAGGCUUUUUCAUUAACGGUAACAAAUGGACAGAUUUGUCGCAUUUUUUUCACUUUUAGAGACUAAAAUUUGAAUUUUUAUCUUUCGGAGACGAAUUUAUUAGUGCUCUGCACAUUCAAGGACAAAAAUGAUUAUUUACCCUUUAAAAUAAGUUUGGCAU

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).