ncRNA ID | gma-miR1534 |
Species | Glycine max |
Class | miRNA |
Genome position | chr6:36715819-36716061 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 214 - UAUUUUGGGUAAAUAGUCAU - 233 |
Stem-loop(if miRNA) |
-- A       A      ---                 CA   C                   C         CU  --   G  --  A   AGGCUUUUUCAUUAACGGUAACAAAUGGACAGAUU   G UUAAAUU UAUUUU   GGGUAAAUAGUCAUUUU  UCC UGAAUGUGUAGAGCGCUAA AAAUUCGUC  UA  AAU UG  UC CAU                                   U   | ||||||| ||||||   |||||||||||||||||  ||| ||||||||||||||||||| |||||||||  ||  ||| ||  || |||   C GGUUUGA AUAAAA   CCCAUUUAUUAGUAAAA  AGG ACUUACACGUCUCGUGAUU UUUAAGCAG  AG  UUU CU  UU UUA                                   G UA -       -      UUU                 AC   A                   A         --  GC   -  AU  -   AGUUUAAAAUCAGAGAUUUUCACUUUUUUUACGCU |
Stem-loop sequence | GAUUAAAUUAUAUUUUGGGUAAAUAGUCAUUUUCAUCCCUGAAUGUGUAGAGCGCUAACAAAUUCGUCCUUAAAUGUGUCACAUAGGCUUUUUCAUUAACGGUAACAAAUGGACAGAUUUGUCGCAUUUUUUUCACUUUUAGAGACUAAAAUUUGAAUUUUUAUCUUUCGGAGACGAAUUUAUUAGUGCUCUGCACAUUCAAGGACAAAAAUGAUUAUUUACCCUUUAAAAUAAGUUUGGCAU |
1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |