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BaseInfo

ncRNA ID ath-miR8177
Species Arabidopsis thaliana
Class miRNA
Genome position chr5:9362559-9362655 [-]
Reference genome TAIR10
Source miRBase
Length 22
Mature sequence(if miRNA) 76 - GUGUGAUGAUGUGUCAUUUAUA - 97
Stem-loop(if miRNA)       UGA     C      ACGGA       AACCAACUUUCAUAUAU
GUGUGA   UGUGU AUUUAU     GAGAGUU                 A
||||||   ||||| ||||||     |||||||                 U
UAUACU   AUACA UAAGUA     AUAUUAA                 G
      -UG     U      -----       ACCCUUGAUUCGGUUUA
Stem-loop sequence GUGUGAUGAUGUGUCAUUUAUACGGAGAGAGUUAACCAACUUUCAUAUAUAUGAUUUGGCUUAGUUCCCAAAUUAUAAUGAAUUACAUAGUUCAUAU

Reference

1 PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots";
Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA;
BMC Genomics. 14:701(2013).