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BaseInfo

ncRNA ID gma-miR4382
Species Glycine max
Class miRNA
Genome position chr6:18676282-18676452 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 136 - UAUGUUAACUGAUUUCAUGGAU - 157
Stem-loop(if miRNA)        AA                             C      A    A                 C    -------------    A
GUACAUA  UUCAGAUCCAUGAAAUCAGUUAACAUAUG CCUUAC GACA UAUUCCUACUUCCCCAU UGGC             UCUG U
|||||||  ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||             ||||
CAUGUAU  AAGUCUAGGUACUUUAGUCAAUUGUAUAU GGAAUG CUGU AUAAGGAUGAAGGGGUA ACUG             AGAC A
       CA                             A      C    G                 U    AAAUUCAAACUAG    C
Stem-loop sequence GUACAUAAAUUCAGAUCCAUGAAAUCAGUUAACAUAUGCCCUUACAGACAAUAUUCCUACUUCCCCAUCUGGCUCUGAUACCAGAGAUCAAACUUAAAGUCAUAUGGGGAAGUAGGAAUAGUGUCCGUAAGGAUAUAUGUUAACUGAUUUCAUGGAUCUGAAACUAUGUAC

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).