ncRNA ID | gma-miR4382 |
Species | Glycine max |
Class | miRNA |
Genome position | chr6:18676282-18676452 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 136 - UAUGUUAACUGAUUUCAUGGAU - 157 |
Stem-loop(if miRNA) |
       AA                             C      A    A                 C    -------------    A GUACAUA  UUCAGAUCCAUGAAAUCAGUUAACAUAUG CCUUAC GACA UAUUCCUACUUCCCCAU UGGC             UCUG U |||||||  ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||             |||| CAUGUAU  AAGUCUAGGUACUUUAGUCAAUUGUAUAU GGAAUG CUGU AUAAGGAUGAAGGGGUA ACUG             AGAC A        CA                             A      C    G                 U    AAAUUCAAACUAG    C |
Stem-loop sequence | GUACAUAAAUUCAGAUCCAUGAAAUCAGUUAACAUAUGCCCUUACAGACAAUAUUCCUACUUCCCCAUCUGGCUCUGAUACCAGAGAUCAAACUUAAAGUCAUAUGGGGAAGUAGGAAUAGUGUCCGUAAGGAUAUAUGUUAACUGAUUUCAUGGAUCUGAAACUAUGUAC |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |