ncRNA ID | gma-miR9750 |
Species | Glycine max |
Class | miRNA |
Genome position | chr6:14453332-14453494 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 6 - UGUAAGUCCAUAUGUGCUCUCU - 27 |
Stem-loop(if miRNA) |
C    C    -                G          UAUUU  UCC          ---AAA   CUGGAUCGAGGAAGCAG  AUUU AGAG GCGCGUAUGGACUUAC ACCUGAAGAU     CU   UGAUGAAGCU      GAU                 A  |||| |||| |||||||||||||||| ||||||||||     ||   ||||||||||      |||                 A  UAAA UCUC CGUGUAUACCUGAAUG UGGACUUCUA     GA   ACUACUUCGA      CUC                 G -    A    U                -          -UUAC  -CC          GAACUU   CUCGUCAAUAUGGUACG |
Stem-loop sequence | CAUUUCAGAGGCGCGUAUGGACUUACGACCUGAAGAUUAUUUCUUCCUGAUGAAGCUAAAGAUCUGGAUCGAGGAAGCAGAAGGCAUGGUAUAACUGCUCCUCUUCAAGAGCUUCAUCACCAGCAUUAUCUUCAGGUGUAAGUCCAUAUGUGCUCUCUAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550815.3 |
|
2.5 | PREDICTED: Glycine max scarecrow-like protein 21 (LOC100813548), mRNA | scarecrow-like protein 21(LOC100813548) | coding protein | psRNATarget | |||||||||
XM_003525617.3 |
|
2.5 | PREDICTED: Glycine max scarecrow-like protein 21 (LOC100815959), mRNA | scarecrow-like protein 21(LOC100815959) | coding protein | psRNATarget |
1 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |