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BaseInfo

ncRNA ID	gma-miR6299
Species	Glycine max
Class	miRNA
Genome position	chr6:12081611-12081707 [+]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	66 - AUUUAAAAUUAUUGAUUUGUCA - 87
Stem-loop(if miRNA)	A        CG       C  U             C  C      UUU  AAUAUUGA  UGACAAA CA UAAUUUUAAAUUA UA UUUGUU   G  ||||||||  ||||||| || ||||||||||||| || ||||||  UUGUGACU  ACUGUUU GU AUUAAAAUUUAAU AU AAAUAG   A -        AU       A  U             A  A      UGU
Stem-loop sequence	AAAUAUUGACGUGACAAACCAUUAAUUUUAAAUUACUACUUUGUUUUUGAUGUGAUAAAAUAAUAAUUUAAAAUUAUUGAUUUGUCAUAUCAGUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003526441.3	ncRNA:22   ACUGUUUAGUUAUUAAAAUUUA   1   |*|*||||||||=||||||||| targets:269   UCAAAAAUCAAUGAUUUUAAAU   290 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100527341 (LOC100527341), mRNA	uncharacterized LOC100527341(LOC100527341)	coding protein	psRNATarget
BT096930.1	ncRNA:22   ACUGUUUAGUUAUUAAAAUUUA   1   |||*|||*=||||||||||||| targets:50   UGAAAAAGUAAUAAUUUUAAAU   71 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-21I16 unknown mRNA	NA	coding protein	psRNATarget
XM_003545243.3	ncRNA:22   ACUGUUUAGUUAUUAAAAUUUA   1   ***||==||||||||||||||* targets:7   AACCAGGUCAAUAAUUUUAAAA   28 Target Full Sequence	3.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 11 (LOC100810977), mRNA	type IV inositol polyphosphate 5-phosphatase 11(LOC100810977)	coding protein	psRNATarget
XM_014778064.1	ncRNA:22   ACUGUUUAGUUAUUAAAAUUUA   1   **|||||*=||||||||||||* targets:1939   AUACAAAAUAAUAAUUUUAAAA   1960 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100803516 (LOC100803516), transcript variant X1, mRNA	uncharacterized LOC100803516(LOC100803516)	coding protein	psRNATarget
XM_014778066.1	ncRNA:22   ACUGUUUAGUUAUUAAAAUUUA   1   **|||||*=||||||||||||* targets:2173   AUACAAAAUAAUAAUUUUAAAA   2194 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100803516 (LOC100803516), transcript variant X3, mRNA	uncharacterized LOC100803516(LOC100803516)	coding protein	psRNATarget

Reference

1	PMID:22559273 "Genome organization and characteristics of soybean microRNAs"; Turner M, Yu O, Subramanian S; BMC Genomics. 13:169(2012).