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BaseInfo

ncRNA ID gma-miR171s
Species Glycine max
Class miRNA
Genome position chr6:10859290-10859391 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - CGAGCCGAAUCAAUACCACUC - 31
Stem-loop(if miRNA) G     G     C         C   U    A    UGCAUAU  AUUUAA
 AAGUG ACUGG GUGGUAUUG UUC GUUC UCUU       GA      U
 ||||| ||||| ||||||||| ||| |||| ||||       ||
 UUCAC UGAUC CACCAUAAC AAG CGAG AGAA       CU      C
-     A     U         U   C    C    -UAAAUU  CCUACA
Stem-loop sequence GAAGUGGACUGGCGUGGUAUUGCUUCUGUUCAUCUUUGCAUAUGAAUUUAAUCACAUCCUCUUAAAUAAGACGAGCCGAAUCAAUACCACUCUAGUACACUU

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).