ncRNA ID | gma-miR171s |
Species | Glycine max |
Class | miRNA |
Genome position | chr6:10859290-10859391 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - CGAGCCGAAUCAAUACCACUC - 31 |
Stem-loop(if miRNA) |
G     G     C         C   U    A    UGCAUAU  AUUUAA  AAGUG ACUGG GUGGUAUUG UUC GUUC UCUU       GA      U  ||||| ||||| ||||||||| ||| |||| ||||       ||  UUCAC UGAUC CACCAUAAC AAG CGAG AGAA       CU      C -     A     U         U   C    C    -UAAAUU  CCUACA |
Stem-loop sequence | GAAGUGGACUGGCGUGGUAUUGCUUCUGUUCAUCUUUGCAUAUGAAUUUAAUCACAUCCUCUUAAAUAAGACGAGCCGAAUCAAUACCACUCUAGUACACUU |
1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |