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BaseInfo

ncRNA ID	gma-miR4405
Species	Glycine max
Class	miRNA
Genome position	chr6:9323849-9323974 [+]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	2 - AUUCUAAGACGGUUAUCUGGGACC - 25
Stem-loop(if miRNA)	C                CU G                 GC  GGUGGCAAACUUGUAAUUAA  AUUCUAAGACGGUUAU  G GACCGUCUUAGAAUGUG  GC                    G  ||||||||||||||||  | |||||||||||||||||  ||  UAAGAUUCUGCCAAUA  U UUGGCAGAAUUUUACAC  AA                    A A                AC G                 AC  CAUUUUUCUUUAAAGCUCAU
Stem-loop sequence	CAUUCUAAGACGGUUAUCUGGGACCGUCUUAGAAUGUGGCGCGGUGGCAAACUUGUAAUUAAGAUACUCGAAAUUUCUUUUUACAACACACAUUUUAAGACGGUUGUCAAUAACCGUCUUAGAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763138.1	ncRNA:24   CCAGGGUCUAUUGGCAGAAUCUUA   1   **|===|||*|||||||||||||| targets:1425   UUUUUUAGAGAACCGUCUUAGAAU   1448 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget
XM_006589010.2	ncRNA:24   CCAGGGUCUAUUGGCAGAAUCUUA   1   **|===|||*|||||||||||||| targets:2134   UUUUUUAGAGAACCGUCUUAGAAU   2157 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).