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BaseInfo

ncRNA ID gma-miR4358
Species Glycine max
Class miRNA
Genome position chr6:3628378-3628543 [-]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 15 - CAGUGCAUGACUAUAUCGCCAG - 36
Stem-loop(if miRNA) U               AA        C     C   ------  -  UCGCCAAUUUGACUGGCGAUUUAGGUUGCGUCAGAAAG
 UUUGUCACUUAUGCU  UGAUAUAG CAUGC CUG      GA UU                                      U
 |||||||||||||||  |||||||| ||||| |||      || ||                                      A
 AAGCGGUGAGUACGA  GCUAUAUC GUACG GAC      CG UC                                      A
A               CC        A     U   UUAAAA  A  AAACUGACCGCUAAAGCGGUUAAACUGAUCGUUACAUU
Stem-loop sequence UUUUGUCACUUAUGCUAAUGAUAUAGCCAUGCCCUGGAUUUCGCCAAUUUGACUGGCGAUUUAGGUUGCGUCAGAAAGUAAUUACAUUGCUAGUCAAAUUGGCGAAAUCGCCAGUCAAACUAGCAAAAUUCAGUGCAUGACUAUAUCGCCAGCAUGAGUGGCGAAA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).