ncRNA ID | gma-miR4358 |
Species | Glycine max |
Class | miRNA |
Genome position | chr6:3628378-3628543 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 15 - CAGUGCAUGACUAUAUCGCCAG - 36 |
Stem-loop(if miRNA) |
U               AA        C     C   ------  -  UCGCCAAUUUGACUGGCGAUUUAGGUUGCGUCAGAAAG  UUUGUCACUUAUGCU  UGAUAUAG CAUGC CUG      GA UU                                      U  |||||||||||||||  |||||||| ||||| |||      || ||                                      A  AAGCGGUGAGUACGA  GCUAUAUC GUACG GAC      CG UC                                      A A               CC        A     U   UUAAAA  A  AAACUGACCGCUAAAGCGGUUAAACUGAUCGUUACAUU |
Stem-loop sequence | UUUUGUCACUUAUGCUAAUGAUAUAGCCAUGCCCUGGAUUUCGCCAAUUUGACUGGCGAUUUAGGUUGCGUCAGAAAGUAAUUACAUUGCUAGUCAAAUUGGCGAAAUCGCCAGUCAAACUAGCAAAAUUCAGUGCAUGACUAUAUCGCCAGCAUGAGUGGCGAAA |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |