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BaseInfo

ncRNA ID gma-miR169t
Species Glycine max
Class miRNA
Genome position chr5:41794128-41794253 [-]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 95 - UAGCCAAGGAUGGACUUGCCUA - 116
Stem-loop(if miRNA) U     CU       A    U  A      UAACUAUU   UU UAC   A      UUAAUUAA
 CAUGU  GGUAGCC AGGA GG CUUGCC        CCA  C   GGG CUUUAU        U
 |||||  ||||||| |||| || ||||||        |||  |   ||| ||||||
 GUACG  UUAUCGG UCCU UC GAACGG        GGU  G   CCC GAAGUA        U
C     -U       C    -  -      --UUAAAU   UU -UU   A      UACUCUGU
Stem-loop sequence UCAUGUCUGGUAGCCAAGGAUGGACUUGCCUAACUAUUCCAUUCUACGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGAAGACCCUUGUUUGGUAAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGC

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).