ncRNA ID | gma-miR169t |
Species | Glycine max |
Class | miRNA |
Genome position | chr5:41794128-41794253 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 95 - UAGCCAAGGAUGGACUUGCCUA - 116 |
Stem-loop(if miRNA) |
U     CU       A    U  A      UAACUAUU   UU UAC   A      UUAAUUAA  CAUGU  GGUAGCC AGGA GG CUUGCC        CCA  C   GGG CUUUAU        U  |||||  ||||||| |||| || ||||||        |||  |   ||| ||||||  GUACG  UUAUCGG UCCU UC GAACGG        GGU  G   CCC GAAGUA        U C     -U       C    -  -      --UUAAAU   UU -UU   A      UACUCUGU |
Stem-loop sequence | UCAUGUCUGGUAGCCAAGGAUGGACUUGCCUAACUAUUCCAUUCUACGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGAAGACCCUUGUUUGGUAAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGC |
1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |