ncRNA ID | gma-miR9760 |
Species | Glycine max |
Class | miRNA |
Genome position | chr5:41683450-41683648 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 174 - UGGAUGAUGUAGUUUUGAUUG - 194 |
Stem-loop(if miRNA) |
C                   C         A     UGCAA        AG  -  UU     CC    UUAAGCACAUCCAAGAGACCAAGACUAAAUU  CUCAACAAUCAAAACUACA CAUCCAGAA AAGCA     UUAGGGAU  UC GA  GUAUG  CUUG                               A  ||||||||||||||||||| ||||||||| |||||     ||||||||  || ||  |||||  ||||                               A  GAGUUGUUAGUUUUGAUGU GUAGGUCUU UUCGU     AAUCCUUA  GG CU  CAUAU  CUGA                               A -                   A         C     -UCUG        AA  A  UU     -C    UGUAGUUCCGGGUUGGAAAUCAAGAAUGGAU |
Stem-loop sequence | CCUCAACAAUCAAAACUACACCAUCCAGAAAAAGCAUGCAAUUAGGGAUAGUCGAUUGUAUGCCCUUGUUAAGCACAUCCAAGAGACCAAGACUAAAUUAAAUAGGUAAGAACUAAAGGUUGGGCCUUGAUGUAGUCCUAUACUUUCAGGAAAUUCCUAAGUCUUGCUUCUUCUGGAUGAUGUAGUUUUGAUUGUUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006587940.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102666659 (LOC102666659), mRNA | uncharacterized LOC102666659(LOC102666659) | coding protein | psRNATarget | |||||||||
XM_006598307.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102662703 (LOC102662703), mRNA | uncharacterized LOC102662703(LOC102662703) | coding protein | psRNATarget |
1 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |