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BaseInfo

ncRNA ID gma-miR9760
Species Glycine max
Class miRNA
Genome position chr5:41683450-41683648 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 174 - UGGAUGAUGUAGUUUUGAUUG - 194
Stem-loop(if miRNA) C                   C         A     UGCAA        AG  -  UU     CC    UUAAGCACAUCCAAGAGACCAAGACUAAAUU
 CUCAACAAUCAAAACUACA CAUCCAGAA AAGCA     UUAGGGAU  UC GA  GUAUG  CUUG                               A
 ||||||||||||||||||| ||||||||| |||||     ||||||||  || ||  |||||  ||||                               A
 GAGUUGUUAGUUUUGAUGU GUAGGUCUU UUCGU     AAUCCUUA  GG CU  CAUAU  CUGA                               A
-                   A         C     -UCUG        AA  A  UU     -C    UGUAGUUCCGGGUUGGAAAUCAAGAAUGGAU
Stem-loop sequence CCUCAACAAUCAAAACUACACCAUCCAGAAAAAGCAUGCAAUUAGGGAUAGUCGAUUGUAUGCCCUUGUUAAGCACAUCCAAGAGACCAAGACUAAAUUAAAUAGGUAAGAACUAAAGGUUGGGCCUUGAUGUAGUCCUAUACUUUCAGGAAAUUCCUAAGUCUUGCUUCUUCUGGAUGAUGUAGUUUUGAUUGUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006587940.1
ncRNA:21   GUUAGUUUUGAUGUAGUAGGU   1
  =|||||*||||*|||||||||
targets:185   UAAUCACAACUUCAUCAUCCA   205

2.5 PREDICTED: Glycine max uncharacterized LOC102666659 (LOC102666659), mRNA uncharacterized LOC102666659(LOC102666659) coding protein psRNATarget
XM_006598307.2
ncRNA:21   GUUAGUUUUGAUGUAGUAGGU   1
  =|||||*||||*|||||||||
targets:210   UAAUCACAACUUCAUCAUCCA   230

2.5 PREDICTED: Glycine max uncharacterized LOC102662703 (LOC102662703), mRNA uncharacterized LOC102662703(LOC102662703) coding protein psRNATarget

Reference

1 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).