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BaseInfo

ncRNA ID	gma-miR4992
Species	Glycine max
Class	miRNA
Genome position	chr5:16504625-16504734 [+]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	80 - AUUCUAAGAUGGUUUUUGUUAG - 101
Stem-loop(if miRNA)	-       C  GACC   U      G            A               U  AGAUGAU UC    CAA AACCGU UUAGAAUGUACG UAUUUUAAGAUGGUC C  ||||||| ||    ||| |||||| |||||||||||| ||||||||||||||| A  UCUGCUA AG    GUU UUGGUA AAUCUUACAUGU AUAAAAUUCUGCCAG G U       -  -AUU   U      G            A               C
Stem-loop sequence	AGAUGAUCUCGACCCAAUAACCGUGUUAGAAUGUACGAUAUUUUAAGAUGGUCUCAGCGACCGUCUUAAAAUAAUGUACAUUCUAAGAUGGUUUUUGUUAGAAUCGUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014772035.1	ncRNA:22   GAUUGUUUUUGGUAGAAUCUUA   1   =|*|=||||||||*|||||||| targets:575   UUUAUAAAAACCACCUUAGAAU   596 Target Full Sequence	2.5	PREDICTED: Glycine max probable manganese-transporting ATPase PDR2 (LOC102667145), mRNA	probable manganese-transporting ATPase PDR2(LOC102667145)	coding protein	psRNATarget
XM_014773077.1	ncRNA:22   GAUUGUUUUUGGUAGAAUCUUA   1   =|*|=|||||||||||||*||| targets:19   UUUAUAAAAACCAUCUUAAAAU   40 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized protein C26H5.07c-like (LOC102666872), mRNA	uncharacterized protein C26H5.07c-like(LOC102666872)	coding protein	psRNATarget
XM_014763138.1	ncRNA:22   GAUUG-UUUUUGGUAGAAUCUUA   1   =||||-||||||||||||||||* targets:1587   UUAACUAAAAACCAUCUUAGAAA   1609 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget
XM_006589010.2	ncRNA:22   GAUUG-UUUUUGGUAGAAUCUUA   1   =||||-||||||||||||||||* targets:2296   UUAACUAAAAACCAUCUUAGAAA   2318 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget

Reference

1	PMID:21504877 "MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011).