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BaseInfo

ncRNA ID gma-miR5672
Species Glycine max
Class miRNA
Genome position chr5:10217626-10217758 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 103 - CAUGGUAGUGGAAGAAAUGGA - 123
Stem-loop(if miRNA) CAAA                          AG          A       -AAUGGA  UAUGUCA
    AUCCUCUCCAUUUCUUCCAUUACUAU  UUUUGGGAAA UAAAUGA       GA       C
    ||||||||||||||||||||||||||  |||||||||| |||||||       ||       A
    UAGGAGAGGUAAAGAAGGUGAUGGUA  AAAGCCCUUU AUUUACU       GU       C
UGUC                          CG          -       AUGAGAG  AAUAAUA
Stem-loop sequence CAAAAUCCUCUCCAUUUCUUCCAUUACUAUAGUUUUGGGAAAAUAAAUGAAAUGGAGAUAUGUCACACAUAAUAAUGGAGAGUAUCAUUUAUUUCCCGAAAGCAUGGUAGUGGAAGAAAUGGAGAGGAUCUGU

Reference

1 PMID:21219599
"Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing";
Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS;
BMC Plant Biol. 11:5(2011).