| ncRNA ID | gma-miR162b |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr5:7692592-7692701 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - UCGAUAAACCUCUGCAUCCAG - 31 |
| Stem-loop(if miRNA) |
U A U A G C C UC C AAUUUGG GA GAGGUGA G C CUGGA GCAG GGUU AUCGAUC UUC UG UUGUG A ||||||| | | ||||| |||| |||| ||||||| ||| || ||||| UUUCACU C G GACCU CGUC CCAA UAGCUGG AAG AC AACAC G - - - C A U A CU A -----GA AA |
| Stem-loop sequence | UGAGGUGAAGUCACUGGAGGCAGCGGUUCAUCGAUCUCUUCCUGAAUUUGGUUGUGGAAGAACACAAAGCAAGAAUCGGUCGAUAAACCUCUGCAUCCAGCGCUCACUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006577296.2 |
|
3.0 | PREDICTED: Glycine max endoribonuclease Dicer homolog 1-like (LOC100780953), mRNA | endoribonuclease Dicer homolog 1-like(LOC100780953) | coding protein | psRNATarget | |||||||||
| XM_006604859.1 |
|
3.0 | PREDICTED: Glycine max endoribonuclease Dicer homolog 1-like (LOC100811631), mRNA | endoribonuclease Dicer homolog 1-like(LOC100811631) | coding protein | psRNATarget |
| 1 | PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011). |
| 2 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |