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BaseInfo

ncRNA ID	gma-miR5777
Species	Glycine max
Class	miRNA
Genome position	chr5:2868133-2868377 [-]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	11 - CUAGCAAUAAUGUUGGAUGCAC - 32
Stem-loop(if miRNA)	G               -                     --CCAG   -UUAAA  GAAAAGACUAAAAUAUCUCUGAUUCAUAAGUCUUUUACGGAUCAAAUGCUUAAUAUCAACAUACGAAUC  CUGAUGCUAGGUGCA CCAGCAUUAUUGCUGGUGCAU      CAC      GA                                                                     A  ||||||||||||||| |||||||||||||||||||||      |||      ||  GACUACGAUCCACGU GGUUGUAAUAACGAUCAUGUG      GUG      CG                                                                     A -               A                     AAAGAA   UAAACA  AUCCACACGCACUCUCACUAGGCAUUUAACAUACCUAGCUCAACUAGGCAUUCUAAUUAUAUUUAAUUC
Stem-loop sequence	GCUGAUGCUAGGUGCACCAGCAUUAUUGCUGGUGCAUCCAGCACUUAAAGAGAAAAGACUAAAAUAUCUCUGAUUCAUAAGUCUUUUACGGAUCAAAUGCUUAAUAUCAACAUACGAAUCAACUUAAUUUAUAUUAAUCUUACGGAUCAACUCGAUCCAUACAAUUUACGGAUCACUCUCACGCACACCUAGCACAAAUGUGAAGAAAGUGUACUAGCAAUAAUGUUGGAUGCACCUAGCAUCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014772461.1	ncRNA:22   CACGUA-GGUUGUAAUAACGAUC   1   *|*|||-||*||||||||||||| targets:297   CUUCAUUCCCACAUUAUUGCUAG   319 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC106797637 (LOC106797637), mRNA	uncharacterized LOC106797637(LOC106797637)	coding protein	psRNATarget

Reference

1

PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011).