ncRNA ID | gma-miR4371c |
Species | Glycine max |
Class | miRNA |
Genome position | chr5:814570-814716 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 112 - GACGUGACAGACGGAAUAUCACAU - 135 |
Stem-loop(if miRNA) |
--         A                   A   CA      C    U           CCAAUU     AUCAC   CUGUUAAGU AUGACGUGACAGACGGAAU UCA  UCAUCA GUUU GUCAUGGACAC      GUCAU     C   ||||||||| ||||||||||||||||||| |||  |||||| |||| |||||||||||      |||||     A   GGCAAUUUA UACUGCAUUGUUUGUUUUA AGU  AGUAGU CAAG UAGUGCCUGUG      CAGUA     C AA         C                   C   AC      A    U           ------     ACUUC |
Stem-loop sequence | CUGUUAAGUAAUGACGUGACAGACGGAAUAUCACAUCAUCACGUUUUGUCAUGGACACCCAAUUGUCAUAUCACCACCUUCAAUGACGUGUCCGUGAUUGAACAUGAUGACAUGACAUUUUGUUUGUUACGUCAUCAUUUAACGGAA |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |
2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |