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BaseInfo

ncRNA ID gma-miR171r
Species Glycine max
Class miRNA
Genome position chr4:46988892-46988993 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 72 - CGAGCCGAAUCAAUACCACUC - 92
Stem-loop(if miRNA) G     G     C         C   U    A    UGCAUAUGAAUUUC
 AAGUG ACUGG GUGGUAUUG UUC GCUC UCUU              A
 ||||| ||||| ||||||||| ||| |||| ||||              U
 UUCAC UGACC CACCAUAAC AAG CGAG AGAA              C
-     A     U         U   C    C    UAAAUUUCCCUACA
Stem-loop sequence GAAGUGGACUGGCGUGGUAUUGCUUCUGCUCAUCUUUGCAUAUGAAUUUCAUCACAUCCCUUUAAAUAAGACGAGCCGAAUCAAUACCACUCCAGUACACUU

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).