ncRNA ID | gma-miR171b-5p |
Species | Glycine max |
Class | miRNA |
Genome position | chr4:46988579-46988670 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 6 - ACGGCGUGAUAUUGGUACGGCUC - 28 |
Stem-loop(if miRNA) |
--- C C A A CAACCAU UAGACA GG GUGAUAUUGGU CGGCUC UCUUAAUU U |||||| || ||||||||||| |||||| |||||||| GUUUGU UC CACUAUAACUA GCCGAG AGAGUUAA A UUC - U A C CAACUAU |
Stem-loop sequence | UAGACACGGCGUGAUAUUGGUACGGCUCAUCUUAAUUCAACCAUUAUAUCAACAAUUGAGACGAGCCGAAUCAAUAUCACUCUUGUUUGCUU |
1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |
2 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |
3 | PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011). |