ncRNA ID | gma-miR319i |
Species | Glycine max |
Class | miRNA |
Genome position | chr4:46348798-46348991 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 164 - UUGGACUGAAGGGGAGCUCCUUC - 186 |
Stem-loop(if miRNA) |
  G    U            -     C   C    GG UUC GG   UUGAA   U   U   GC    G   AC          A   AGAAUAGUGAUU AA AGAG GAAGGAGCUUCC UUCAG CCA GCAU  G   G  GGA     GGG UGC GAA  AUCU CUG  UCAUUCAUAC CAC            C || |||| |||||||||||| ||||| ||| ||||  |   |  |||     ||| ||| |||  |||| |||  |||||||||| |||            A UU UCUU CUUCCUCGAGGG AAGUC GGU CGUG  U   C  UCU     CCC ACG UUU  UAGA GAC  AGUAAGUGUG UUA            A   G    U            G     A   U    UU --- UU   -----   U   U   -A    G   GA          -   AUGGAAUCGUUA |
Stem-loop sequence | AAGAGAGUGAAGGAGCUUCCUUCAGCCCACGCAUGGGUUCGGGGGAUUGAAGGGUUGCUGAAGCAUCUGCUGACUCAUUCAUACACACAGAAUAGUGAUUCAAAUUGCUAAGGUAAUUGUGUGAAUGAAGCAGGAGAUAUUUUGCAUCCCUCUUUCUUUGUGCUUGGACUGAAGGGGAGCUCCUUCUUUCUGUU |
1 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |
2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |