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BaseInfo

ncRNA ID gma-miR319i
Species Glycine max
Class miRNA
Genome position chr4:46348798-46348991 [+]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 164 - UUGGACUGAAGGGGAGCUCCUUC - 186
Stem-loop(if miRNA)   G    U            -     C   C    GG UUC GG   UUGAA   U   U   GC    G   AC          A   AGAAUAGUGAUU
AA AGAG GAAGGAGCUUCC UUCAG CCA GCAU  G   G  GGA     GGG UGC GAA  AUCU CUG  UCAUUCAUAC CAC            C
|| |||| |||||||||||| ||||| ||| ||||  |   |  |||     ||| ||| |||  |||| |||  |||||||||| |||            A
UU UCUU CUUCCUCGAGGG AAGUC GGU CGUG  U   C  UCU     CCC ACG UUU  UAGA GAC  AGUAAGUGUG UUA            A
  G    U            G     A   U    UU --- UU   -----   U   U   -A    G   GA          -   AUGGAAUCGUUA
Stem-loop sequence AAGAGAGUGAAGGAGCUUCCUUCAGCCCACGCAUGGGUUCGGGGGAUUGAAGGGUUGCUGAAGCAUCUGCUGACUCAUUCAUACACACAGAAUAGUGAUUCAAAUUGCUAAGGUAAUUGUGUGAAUGAAGCAGGAGAUAUUUUGCAUCCCUCUUUCUUUGUGCUUGGACUGAAGGGGAGCUCCUUCUUUCUGUU

Reference

1 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).
2 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).