ncRNA ID | gma-miR4377 |
Species | Glycine max |
Class | miRNA |
Genome position | chr4:16731847-16732014 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 144 - UACGUCAUCGCUGAAUGGAAGACG - 167 |
Stem-loop(if miRNA) |
UUUA A A ---GACGAAC UAAUCACU A G CG A UCUUCUGUU AGUGAUGAC UGGCA CACGUUAUUAUGUU GACAC UCA UAUCA UCAUUG G ||||||||| ||||||||| ||||| |||||||||||||| ||||| ||| ||||| |||||| AGAAGGUAA UCGCUACUG AUCGU GUGUAGUAGUGUAG CUGUG AGU AUAGU AGUAAU G -AGC G C AUAUAUUACA CACAAUAC A A AU G |
Stem-loop sequence | UUUAUCUUCUGUUAAGUGAUGACAUGGCAGACGAACCACGUUAUUAUGUUUAAUCACUGACACAUCAGUAUCACGUCAUUGAGGGUAAUGAUAUGAUAAUGAAGUGUCCAUAACACGAUGUGAUGAUGUGACAUUAUAUAUGCUACGUCAUCGCUGAAUGGAAGACGA |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |