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BaseInfo

ncRNA ID gma-miR4377
Species Glycine max
Class miRNA
Genome position chr4:16731847-16732014 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 144 - UACGUCAUCGCUGAAUGGAAGACG - 167
Stem-loop(if miRNA) UUUA         A         A     ---GACGAAC              UAAUCACU     A   G     CG      A
    UCUUCUGUU AGUGAUGAC UGGCA          CACGUUAUUAUGUU        GACAC UCA UAUCA  UCAUUG G
    ||||||||| ||||||||| |||||          ||||||||||||||        ||||| ||| |||||  ||||||
    AGAAGGUAA UCGCUACUG AUCGU          GUGUAGUAGUGUAG        CUGUG AGU AUAGU  AGUAAU G
-AGC         G         C     AUAUAUUACA              CACAAUAC     A   A     AU      G
Stem-loop sequence UUUAUCUUCUGUUAAGUGAUGACAUGGCAGACGAACCACGUUAUUAUGUUUAAUCACUGACACAUCAGUAUCACGUCAUUGAGGGUAAUGAUAUGAUAAUGAAGUGUCCAUAACACGAUGUGAUGAUGUGACAUUAUAUAUGCUACGUCAUCGCUGAAUGGAAGACGA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).