ncRNA ID | gma-miR5773 |
Species | Glycine max |
Class | miRNA |
Genome position | chr3:46862488-46862660 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 11 - UUUUUAAAAGGUUCAGUUAGGU - 32 |
Stem-loop(if miRNA) |
- A   UC                          C             A     UCAAUU        ----   -A   UCAUU       A  G UUU  UUAUUUUUAAAAGGUUCAGUUAGGUC UUUAUUUUUUAAA UGGGU      UGGUCCCA    CUU  AAC     UUUUGAA A  | |||  |||||||||||||||||||||||||| ||||||||||||| |||||      ||||||||    |||  |||     |||||||  C AGG  AAUAAAAAUUUUCCAAGUUAAUCCAG AAAUAAAAAAUUU ACCCA      ACCAGGGU    GAA  UUG     GAAGCUU U A C   GA                          A             A     ------        AAAA   GG   ---UC       G |
Stem-loop sequence | GAUUUUCUUAUUUUUAAAAGGUUCAGUUAGGUCCUUUAUUUUUUAAAAUGGGUUCAAUUUGGUCCCACUUAAACUCAUUUUUUGAAAAUGUUCGAAGCUGUUGGAAGAAAAUGGGACCAACCCAAUUUAAAAAAUAAAAGACCUAAUUGAACCUUUUAAAAAUAAAGGGACCA |
1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |