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BaseInfo

ncRNA ID gma-miR4399
Species Glycine max
Class miRNA
Genome position chr3:25185812-25185962 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 122 - UUAACGAAAAAGGACUAACGAC - 143
Stem-loop(if miRNA) CAAUU      G           UC   C        A         G    AG   GU  AAUUA       CACAU
     UAUUAU UGUCGUUAGUC  UUU UGUUAAGU AUGACGUGG AGAC  AGU  CA     UCAUUGA     U
     |||||| |||||||||||  ||| |||||||| ||||||||| ||||  |||  ||     |||||||     A
     AUGAUG ACAGCAAUCAG  AAA GCAAUUCA UACUGUACC UCUG  UCA  GU     AGUAACU     U
-----      G           GA   A        C         G    CU   UG  ---GC       UCCUC
Stem-loop sequence CAAUUUAUUAUGUGUCGUUAGUCUCUUUCUGUUAAGUAAUGACGUGGGAGACAGAGUGUCAAAUUAUCAUUGACACAUUAUCUCCUUCAAUGACGUGGUACUUCGUCUGCCAUGUCAUCACUUAACGAAAAAGGACUAACGACAGGUAGUA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).