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BaseInfo

ncRNA ID gma-miR5774a
Species Glycine max
Class miRNA
Genome position chr3:20991346-20991495 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 120 - GCUGGCGUCGACACGUGGCAU - 140
Stem-loop(if miRNA) A     -   AG  G  -   GA      -  A  G    A     UUAAACUGGCGAUUUGUAAGUAGCAGGGC
 CGAGU UUG  CU GC GUC  CACGUG GC UG GACU GUCAG                             U
 ||||| |||  || || |||  |||||| || || |||| |||||                             C
 GUUCA GAC  GG CG CGG  GUGCGC CG AU UUGG ACUUU                             C
A     C   GA  A  A   AA      A  G  G    G     UUCGACUCGACGUUGGGACUUUUUCGACU
Stem-loop sequence ACGAGUUUGAGCUGGCGUCGACACGUGGCAUGGGACUAGUCAGUUAAACUGGCGAUUUGUAAGUAGCAGGGCUCCUCAGCUUUUUCAGGGUUGCAGCUCAGCUUUUUCAGGGUUGUAGGCACGCGUGAAGGCAGCAGGAGCAGCACUUGA

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).