ncRNA ID | gma-miR5774a |
Species | Glycine max |
Class | miRNA |
Genome position | chr3:20991346-20991495 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 120 - GCUGGCGUCGACACGUGGCAU - 140 |
Stem-loop(if miRNA) |
A     -   AG  G  -   GA      -  A  G    A     UUAAACUGGCGAUUUGUAAGUAGCAGGGC  CGAGU UUG  CU GC GUC  CACGUG GC UG GACU GUCAG                             U  ||||| |||  || || |||  |||||| || || |||| |||||                             C  GUUCA GAC  GG CG CGG  GUGCGC CG AU UUGG ACUUU                             C A     C   GA  A  A   AA      A  G  G    G     UUCGACUCGACGUUGGGACUUUUUCGACU |
Stem-loop sequence | ACGAGUUUGAGCUGGCGUCGACACGUGGCAUGGGACUAGUCAGUUAAACUGGCGAUUUGUAAGUAGCAGGGCUCCUCAGCUUUUUCAGGGUUGCAGCUCAGCUUUUUCAGGGUUGUAGGCACGCGUGAAGGCAGCAGGAGCAGCACUUGA |
1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |