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BaseInfo

ncRNA ID gma-miR5772
Species Glycine max
Class miRNA
Genome position chr3:18240702-18240819 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AGAAUGUGAGUUAGAGUGAGCAUC - 34
Stem-loop(if miRNA) -    C   CA  AA     GU    G    ---CAUCC  AAAAAAAGAAUUUCAAAUUC
 GUCG AAG  AG  UGUGA  UAGA UGAG        CU                    U
 |||| |||  ||  |||||  |||| ||||        ||
 CAGC UUC  UC  ACGCU  GUCU AUUU        UA                    A
G    A   CA  CA     --    G    UAUCACCC  AAGUUUAAGAGAGUUUUUAU
Stem-loop sequence GUCGCAAGCAAGAAUGUGAGUUAGAGUGAGCAUCCCUAAAAAAAGAAUUUCAAAUUCUAUAUUUUUGAGAGAAUUUGAAAUCCCACUAUUUUAGUCUGUCGCAACCUACCUUACGACG

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).