ncRNA ID | gma-miR5772 |
Species | Glycine max |
Class | miRNA |
Genome position | chr3:18240702-18240819 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AGAAUGUGAGUUAGAGUGAGCAUC - 34 |
Stem-loop(if miRNA) |
-    C   CA  AA     GU    G    ---CAUCC  AAAAAAAGAAUUUCAAAUUC  GUCG AAG  AG  UGUGA  UAGA UGAG        CU                    U  |||| |||  ||  |||||  |||| ||||        ||  CAGC UUC  UC  ACGCU  GUCU AUUU        UA                    A G    A   CA  CA     --    G    UAUCACCC  AAGUUUAAGAGAGUUUUUAU |
Stem-loop sequence | GUCGCAAGCAAGAAUGUGAGUUAGAGUGAGCAUCCCUAAAAAAAGAAUUUCAAAUUCUAUAUUUUUGAGAGAAUUUGAAAUCCCACUAUUUUAGUCUGUCGCAACCUACCUUACGACG |
1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |