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BaseInfo

ncRNA ID	gma-miR164c
Species	Glycine max
Class	miRNA
Genome position	chr3:5291969-5292058 [-]
Reference genome	v1.0
Source	miRBase
Length	20
Mature sequence(if miRNA)	61 - UGGAGAAGCAGGGCACGUGC - 80
Stem-loop(if miRNA)	CUGAGC    U       C      C   CAA     --AC  -   A       AAGA GGAGAAG AGGGCA GUG   UUCUA    UC AUG A       |||| ||||||| |||||| |||   |||||    || |||       UUCU CUUCUUU UUUUGU CAC   AAGAU    AG UAC A ----UU    U       -      U   UAA     ACUA  A   C
Stem-loop sequence	CUGAGCAAGAUGGAGAAGCAGGGCACGUGCAAUUCUAACUCAUGAAACCAUAGAAUCAUAGAAAAUCACUUGUUUUUUUCUUCUUCUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003524678.3	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=|||||||||||||||||| targets:897   UUACGUGCCCUGCUUCUCCA   916 Target Full Sequence	1.0	PREDICTED: Glycine max NAC domain-containing protein 100-like (LOC100798002), mRNA	NAC domain-containing protein 100-like(LOC100798002)	coding protein	psRNATarget
XM_003549636.3	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=|||||||||||||||||| targets:812   UUACGUGCCCUGCUUCUCCA   831 Target Full Sequence	1.0	PREDICTED: Glycine max NAC domain-containing protein 100 (LOC100170719), mRNA	NAC domain-containing protein 100(LOC100170719)	coding protein	psRNATarget
NM_001248970.3	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=|||||||||||||||||| targets:775   UUACGUGCCCUGCUUCUCCA   794 Target Full Sequence	1.0	Glycine max NAC domain protein NAC5 (NAC5), mRNA	no apical meristem-like protein(LOC547650)	coding protein	psRNATarget
AF532619.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=|||||||||||||||||| targets:778   UUACGUGCCCUGCUUCUCCA   797 Target Full Sequence	1.0	Glycine max no apical meristem-like protein mRNA, complete cds	NA	coding protein	psRNATarget
DQ028773.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=|||||||||||||||||| targets:710   UUACGUGCCCUGCUUCUCCA   729 Target Full Sequence	1.0	Glycine max NAC domain protein NAC5 (NAC5) mRNA, complete cds	NA	coding protein	psRNATarget
EU661925.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=|||||||||||||||||| targets:785   UUACGUGCCCUGCUUCUCCA   804 Target Full Sequence	1.0	Glycine max NAC domain protein (NAC28) mRNA, partial cds	NA	coding protein	psRNATarget
BT094159.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=|||||||||||||||||| targets:735   UUACGUGCCCUGCUUCUCCA   754 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-18C12 unknown mRNA	NA	coding protein	psRNATarget
EU661927.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   |||*|||||||||||||||| targets:650   GCAAGUGCCCUGCUUCUCCA   669 Target Full Sequence	1.0	Glycine max NAC domain protein (NAC34) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001248972.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   |||*|||||||||||||||| targets:637   GCAAGUGCCCUGCUUCUCCA   656 Target Full Sequence	1.0	Glycine max transcriptional factor NAC35 (NAC35), mRNA	transcriptional factor NAC35(NAC35)	coding protein	psRNATarget
EU440355.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   |||*|||||||||||||||| targets:637   GCAAGUGCCCUGCUUCUCCA   656 Target Full Sequence	1.0	Glycine max transcriptional factor NAC35 (NAC35) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001251326.2	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   |||*|||||||||||||||| targets:648   GCAAGUGCCCUGCUUCUCCA   667 Target Full Sequence	1.0	Glycine max NAC domain protein (NAC34), mRNA	NAC domain protein(NAC34)	coding protein	psRNATarget
KT031221.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   |||*|||||||||||||||| targets:603   GCAAGUGCCCUGCUUCUCCA   622 Target Full Sequence	1.0	Glycine max clone HN_CCL_172 NAC transcription factor (Glyma15g40510.1) mRNA, partial cds	NA	coding protein	psRNATarget
KT031214.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   |||*|||||||||||||||| targets:603   GCAAGUGCCCUGCUUCUCCA   622 Target Full Sequence	1.0	Glycine max clone HN_CCL_61 NAC transcription factor (Glyma08g18470.1) mRNA, partial cds	NA	coding protein	psRNATarget
JX392400.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=||||*||||||||||||| targets:756   UUACGUACCCUGCUUCUCCA   775 Target Full Sequence	2.0	Glycine max NAC domain protein (NLP) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001289292.1	ncRNA:20   CGUGCACGGGACGAAGAGGU   1   *=||||*||||||||||||| targets:756   UUACGUACCCUGCUUCUCCA   775 Target Full Sequence	2.0	Glycine max NAC domain-containing protein 100-like (NLP), mRNA	NAC domain-containing protein 100-like(NLP)	coding protein	psRNATarget

Reference

1	PMID:21504877 "MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011).