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BaseInfo

ncRNA ID	gma-miR9746a
Species	Glycine max
Class	miRNA
Genome position	chr3:2808241-2808350 [+]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	82 - AAAGUGUUUGAAUCUCAAUUAGAU - 105
Stem-loop(if miRNA)	AC       C                       A     C          GUUU   GGUUAUC AAUUGAGAUUCAAGCACUUUUCU UGUGG UUUAAGGUGU    G   ||||||| ||||||||||||||||||||||| ||||| ||||||||||    A   CCAAUAG UUAACUCUAAGUUUGUGAAAAGA GUACC AAAUUCCACA    A -A       A                       A     U          AGGU
Stem-loop sequence	ACGGUUAUCCAAUUGAGAUUCAAGCACUUUUCUAUGUGGCUUUAAGGUGUGUUUGAAUGGAACACCUUAAAUCCAUGAAGAAAAGUGUUUGAAUCUCAAUUAGAUAACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764425.1	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||||||||||||=|||||| targets:1069   AUCCAAUUGAGAUUCAAGCACUUU   1092 Target Full Sequence	1.5	PREDICTED: Glycine max probable alkaline/neutral invertase F (LOC100796039), transcript variant X4, mRNA	probable alkaline/neutral invertase F(LOC100796039)	coding protein	psRNATarget
XM_014764424.1	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||||||||||||=|||||| targets:1023   AUCCAAUUGAGAUUCAAGCACUUU   1046 Target Full Sequence	1.5	PREDICTED: Glycine max probable alkaline/neutral invertase F (LOC100796039), transcript variant X3, mRNA	probable alkaline/neutral invertase F(LOC100796039)	coding protein	psRNATarget
XM_006591975.2	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||||||||||||=|||||| targets:1068   AUCCAAUUGAGAUUCAAGCACUUU   1091 Target Full Sequence	1.5	PREDICTED: Glycine max probable alkaline/neutral invertase F (LOC100796039), transcript variant X1, mRNA	probable alkaline/neutral invertase F(LOC100796039)	coding protein	psRNATarget
XM_003540579.3	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||||||||||||=|||||| targets:1584   AUCCAAUUGAGAUUCAAGCACUUU   1607 Target Full Sequence	1.5	PREDICTED: Glycine max probable alkaline/neutral invertase F (LOC100796039), transcript variant X2, mRNA	probable alkaline/neutral invertase F(LOC100796039)	coding protein	psRNATarget
XM_014772800.1	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:852   AUCCAAUAGAGAUUCAAGCACUUU   875 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100803655), transcript variant X4, mRNA	probable alkaline/neutral invertase D(LOC100803655)	coding protein	psRNATarget
XM_014772799.1	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:976   AUCCAAUAGAGAUUCAAGCACUUU   999 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100803655), transcript variant X3, mRNA	probable alkaline/neutral invertase D(LOC100803655)	coding protein	psRNATarget
XM_014763319.1	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:996   AUCCAAUAGAGAUUCAAGCACUUU   1019 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100781129), transcript variant X4, mRNA	probable alkaline/neutral invertase D(LOC100781129)	coding protein	psRNATarget
XM_006589382.2	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:1018   AUCCAAUAGAGAUUCAAGCACUUU   1041 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100781129), transcript variant X2, mRNA	probable alkaline/neutral invertase D(LOC100781129)	coding protein	psRNATarget
XM_014763320.1	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:1085   AUCCAAUAGAGAUUCAAGCACUUU   1108 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100781129), transcript variant X5, mRNA	probable alkaline/neutral invertase D(LOC100781129)	coding protein	psRNATarget
XM_003536324.3	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:1117   AUCCAAUAGAGAUUCAAGCACUUU   1140 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100781129), transcript variant X3, mRNA	probable alkaline/neutral invertase D(LOC100781129)	coding protein	psRNATarget
XM_006589381.2	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:1120   AUCCAAUAGAGAUUCAAGCACUUU   1143 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100781129), transcript variant X1, mRNA	probable alkaline/neutral invertase D(LOC100781129)	coding protein	psRNATarget
XM_006606164.2	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:1266   AUCCAAUAGAGAUUCAAGCACUUU   1289 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100803655), transcript variant X2, mRNA	probable alkaline/neutral invertase D(LOC100803655)	coding protein	psRNATarget
XM_003556162.3	ncRNA:24   UAGAUUAACUCUAAGUUUGUGAAA   1   |||*|||*|||||||||=|||||| targets:1303   AUCCAAUAGAGAUUCAAGCACUUU   1326 Target Full Sequence	2.5	PREDICTED: Glycine max probable alkaline/neutral invertase D (LOC100803655), transcript variant X1, mRNA	probable alkaline/neutral invertase D(LOC100803655)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).