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BaseInfo

ncRNA ID	gma-miR5043
Species	Glycine max
Class	miRNA
Genome position	chr20:45843145-45843295 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	61 - UGUCCCCUUCUCUGCACCACC - 81
Stem-loop(if miRNA)	---------C --   A ----- ACCGCCGCGUUCAUGUCCAUUUCCCACAACCUUAAAACCGGCGGCAUCUUGGUGUCCCC           G  ACG C     G                                                           U           |  ||| |     |           C  GUA A     G                                                           U AUUCCAACAC CU   - UAAAU GGAAGAGCCGUAGUACCACAGGGGAAGAUACGUGGUAGAACUCCUUCCCACCACGUCUC
Stem-loop sequence	CGACGACGACCGCCGCGUUCAUGUCCAUUUCCCACAACCUUAAAACCGGCGGCAUCUUGGUGUCCCCUUCUCUGCACCACCCUUCCUCAAGAUGGUGCAUAGAAGGGGACACCAUGAUGCCGAGAAGGGUAAAUAAUGUCCCACAACCUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003541772.3	ncRNA:21   CCACCACGUCUCUUCCCCUGU   1   |*|||||*|||||=||||||| targets:621   GAUGGUGAAGAGAGGGGGACA   641 Target Full Sequence	2.5	PREDICTED: Glycine max TPR repeat-containing thioredoxin TTL1 (LOC100795358), mRNA	TPR repeat-containing thioredoxin TTL1(LOC100795358)	coding protein	psRNATarget

Reference

1	PMID:21751852 "Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011).