ncRNA ID | ath-miR8173 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr5:7478569-7478673 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 4 - AUGUGCUGAUUCGAGGUGGGA - 24 |
Stem-loop(if miRNA) |
U           -         CA   A   UCAU  UUG      AC A  U  UCUUUUACCUC AAUCAGCAU  CUA UCU    AG   UUACCA  G GC G  ||||||||||| |||||||||  ||| |||    ||   ||||||  | || U  GGAGGGUGGAG UUAGUCGUG  GAU GGA    UC   AAUGGU  C CG U G           C         UA   -   -UCC  -UA      AA C  G |
Stem-loop sequence | UUCUUUUACCUCAAUCAGCAUCACUAAUCUUCAUAGUUGUUACCAACGAGCUGUUGGCCCAAUGGUAAAUCUCCUAGGUAGAUGUGCUGAUUCGAGGUGGGAGGG |
1 | PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013). |