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BaseInfo

ncRNA ID ath-miR8173
Species Arabidopsis thaliana
Class miRNA
Genome position chr5:7478569-7478673 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 4 - AUGUGCUGAUUCGAGGUGGGA - 24
Stem-loop(if miRNA) U           -         CA   A   UCAU  UUG      AC A  U
 UCUUUUACCUC AAUCAGCAU  CUA UCU    AG   UUACCA  G GC G
 ||||||||||| |||||||||  ||| |||    ||   ||||||  | || U
 GGAGGGUGGAG UUAGUCGUG  GAU GGA    UC   AAUGGU  C CG U
G           C         UA   -   -UCC  -UA      AA C  G
Stem-loop sequence UUCUUUUACCUCAAUCAGCAUCACUAAUCUUCAUAGUUGUUACCAACGAGCUGUUGGCCCAAUGGUAAAUCUCCUAGGUAGAUGUGCUGAUUCGAGGUGGGAGGG

Reference

1 PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots";
Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA;
BMC Genomics. 14:701(2013).