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BaseInfo

ncRNA ID gma-miR167e
Species Glycine max
Class miRNA
Genome position chr20:37901896-37902004 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 19 - UGAAGCUGCCAGCAUGAUCUU - 39
Stem-loop(if miRNA)       -A  ----     C  U           G        UAA   C  U AC
UCAUGC  CC    ACUAC AG UGAAGCUGCCA CAUGAUCU   CUU CC C  U
||||||  ||    ||||| || ||||||||||| ||||||||   ||| || |  U
AGUACG  GG    UGAUG UC ACUUUGACGGU GUACUAGA   GAA GG G  G
      CC  UCGU     A  C           -        CUA   A  U CC
Stem-loop sequence UCAUGCACCACUACCAGUUGAAGCUGCCAGCAUGAUCUUAACUUCCCUCACUUGCCGUGGAAAGAUCAGAUCAUGUGGCAGUUUCACCUAGUAGUUGCUGGCCGCAUGA

Reference

1 PMID:19084500
"Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules";
Wang Y, Li P, Cao X, Wang X, Zhang A, Li X;
Biochem Biophys Res Commun. 378:799-803(2009).
2 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).
3 PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean";
Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL;
J Exp Bot. 62:2495-2506(2011).