ncRNA ID | gma-miR167e |
Species | Glycine max |
Class | miRNA |
Genome position | chr20:37901896-37902004 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 19 - UGAAGCUGCCAGCAUGAUCUU - 39 |
Stem-loop(if miRNA) |
      -A  ----     C  U           G        UAA   C  U AC UCAUGC  CC    ACUAC AG UGAAGCUGCCA CAUGAUCU   CUU CC C  U ||||||  ||    ||||| || ||||||||||| ||||||||   ||| || |  U AGUACG  GG    UGAUG UC ACUUUGACGGU GUACUAGA   GAA GG G  G       CC  UCGU     A  C           -        CUA   A  U CC |
Stem-loop sequence | UCAUGCACCACUACCAGUUGAAGCUGCCAGCAUGAUCUUAACUUCCCUCACUUGCCGUGGAAAGAUCAGAUCAUGUGGCAGUUUCACCUAGUAGUUGCUGGCCGCAUGA |
1 | PMID:19084500
"Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules"; Wang Y, Li P, Cao X, Wang X, Zhang A, Li X; Biochem Biophys Res Commun. 378:799-803(2009). |
2 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |
3 | PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011). |