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BaseInfo

ncRNA ID gma-miR167i
Species Glycine max
Class miRNA
Genome position chr20:37901842-37901992 [-]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 67 - UCAUGCUGGCAGCUUCAACUGGU - 89
Stem-loop(if miRNA) CA   ----     GUGAAACUGCCACAUGAUCUGAUCUUUCCACGGCAAGUGAGGGAAGUUAAGAUCAUGCUGGC
  ACU    ACUAG                                                              A
  |||    |||||                                                              G
  UGG    UCUUG                                                              C
AA   AAAA     UGAACAAGACCAAGAACAAGAAGGGUUAUAGACAGAUGGUAGUACGUGGUGAUGGUCAACUU
Stem-loop sequence CAACUACUAGGUGAAACUGCCACAUGAUCUGAUCUUUCCACGGCAAGUGAGGGAAGUUAAGAUCAUGCUGGCAGCUUCAACUGGUAGUGGUGCAUGAUGGUAGACAGAUAUUGGGAAGAACAAGAACCAGAACAAGUGUUCUAAAAGGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242735.1
ncRNA:23   UGGUCAACUUCGACGGUCGUACU   1
  |*|||||||||||||||||||||
targets:5   AGCAGUUGAAGCUGCCAGCAUGA   27

0.0 Sequence 8730 from Patent EP2985353 NA coding protein psRNATarget
JB171066.1
ncRNA:23   UGGUCAACUUCGACGGUCGUACU   1
  |*|||||||||||||||||||||
targets:5   AGCAGUUGAAGCUGCCAGCAUGA   27

0.0 Sequence 8730 from Patent EP2559767 NA coding protein psRNATarget
HI410605.1
ncRNA:23   UGGUCAACUUCGACGGUCGUACU   1
  |*|||||||||||||||||||||
targets:5   AGCAGUUGAAGCUGCCAGCAUGA   27

0.0 Sequence 8730 from Patent EP2074227 NA coding protein psRNATarget
JB171012.1
ncRNA:23   UGGUCAACUUCGACGGUCGUACU   1
  |**=|||||||||||||||||||
targets:5   AGAGGUUGAAGCUGCCAGCAUGA   27

0.0 Sequence 8676 from Patent EP2559767 NA coding protein psRNATarget
HI410551.1
ncRNA:23   UGGUCAACUUCGACGGUCGUACU   1
  |**=|||||||||||||||||||
targets:5   AGAGGUUGAAGCUGCCAGCAUGA   27

0.0 Sequence 8676 from Patent EP2074227 NA coding protein psRNATarget
LQ242681.1
ncRNA:23   UGGUCAACUUCGACGGUCGUACU   1
  |**=|||||||||||||||||||
targets:5   AGAGGUUGAAGCUGCCAGCAUGA   27

0.0 Sequence 8676 from Patent EP2985353 NA coding protein psRNATarget

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).