ncRNA ID | gma-miR4414-5p |
Species | Glycine max |
Class | miRNA |
Genome position | chr20:35663002-35663129 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 11 - AGCUGCUGACUCGUUGGCUC - 30 |
Stem-loop(if miRNA) |
--      ACU     G   AC       C   AG   U       --------AA   AGAUUGAUG   ACUGAA   CAGCU CUG  UCGUUGG UCG  AGU CACCAUU          GAU         U   ||||||   ||||| |||  ||||||| |||  ||| |||||||          |||         U   UGACUU   GUCGA GGC  AGCAACC AGU  UCG GUGGUGG          CCG         C GC      -AC     G   GU       U   CU   U       AAUUAAUGUA   CACUCACGG |
Stem-loop sequence | ACUGAAACUCAGCUGCUGACUCGUUGGCUCGAGAGUUCACCAUUAAGAUAGAUUGAUGUUCGGCACUCACGCCAUGUAAUUAAGGUGGUGUGCUUCUGAUCCAACGAUGCGGGAGCUGCAUUCAGUCG |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |
2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |