Search result

BaseInfo

ncRNA ID	gma-miR9748
Species	Glycine max
Class	miRNA
Genome position	chr20:3670847-3670942 [+]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	6 - GAAGGAAGUGUAGAGGGAUGAC - 27
Stem-loop(if miRNA)	-UA C         UG  G      G      A         U   U    G AGAAGGAAG  UA AGGGAU ACUUAU UGUAUAGGA CGG U    | |||||||||  || |||||| |||||| ||||||||| ||| U    C UCUUCCUUU  AU UCCUUA UGAAUA ACAUGUUUU GUU C AAG A         GU  A      A      A         U   C
Stem-loop sequence	UAGCAGAAGGAAGUGUAGAGGGAUGACUUAUAUGUAUAGGAUCGGUUUCCUUGUUUUUGUACAAAUAAGUAAUUCCUAUAUGUUUCCUUCUACGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006587940.1	ncRNA:21   GUUAGUUUUGAUGUAGUAGGU   1   =|||||*||||*||||||||| targets:185   UAAUCACAACUUCAUCAUCCA   205 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102666659 (LOC102666659), mRNA	uncharacterized LOC102666659(LOC102666659)	coding protein	psRNATarget
XM_006598307.2	ncRNA:21   GUUAGUUUUGAUGUAGUAGGU   1   =|||||*||||*||||||||| targets:210   UAAUCACAACUUCAUCAUCCA   230 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102662703 (LOC102662703), mRNA	uncharacterized LOC102662703(LOC102662703)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).