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BaseInfo

ncRNA ID gma-miR4400
Species Glycine max
Class miRNA
Genome position chr20:1764848-1765004 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 15 - UUCGGAAAAAUUCUGGAAGACGUC - 38
Stem-loop(if miRNA)                               A G     ACUCCGAAAAACUCCUAGAAGA     CUUCCGGAAGAAGAAGGUGGG
CGGAAGACUCUUCUUUCGGAAAAAUUCUGG A ACGUC                      ACCUU                     C
|||||||||||||||||||||||||||||| | |||||                      |||||                     C
GUCUUCUGGGAAGAAAGCUUUUUUAAGGCC U UGCAG                      GUCUU                     U
                              C G     ------------------GAAC     GCAUAAGACCUCAAGAAGCCC
Stem-loop sequence CGGAAGACUCUUCUUUCGGAAAAAUUCUGGAAGACGUCACUCCGAAAAACUCCUAGAAGAACCUUCUUCCGGAAGAAGAAGGUGGGCCUCCCGAAGAACUCCAGAAUACGUUCUGCAAGGACGUGUCCCGGAAUUUUUUCGAAAGAAGGGUCUUCUG

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).