| ncRNA ID | ath-miR5631 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr5:7122566-7122688 [-] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UGGCAGGAAAGACAUAAUUUU - 21 |
| Stem-loop(if miRNA) |
C -- AAUAUC UUAUACAUA AAAAUUAUGUC UUCCUGCCAUAUUAUAU UUAGGAAAAAAU GUA U ||||||||||| ||||||||||||||||| |||||||||||| ||| A UUUUAAUACAG AAGGACGGUAUAAUAUA AAUCCUUUUUUA UCU A A UA AUAAAU CCGAAGACA |
| Stem-loop sequence | AAAAUUAUGUCCUUCCUGCCAUAUUAUAUUUAGGAAAAAAUAAUAUCGUAUUAUACAUAUAAACAGAAGCCUCUUAAAUAAUUUUUUCCUAAAUAUAUAAUAUGGCAGGAAAGACAUAAUUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_180718.2 |
|
0.0 | Arabidopsis thaliana aldehyde oxidase 1 (AO1), mRNA | aldehyde oxidase 1(AO1) | coding protein | psRNATarget | |||||||||
| AB005804.1 |
|
0.0 | Arabidopsis thaliana AAO1 mRNA for aldehyde oxidase, complete cds | NA | coding protein | psRNATarget |
| 1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |