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BaseInfo

ncRNA ID gma-miR390d
Species Glycine max
Class miRNA
Genome position chr2:44954757-44954853 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 12 - AAGCUCAGGAGGGAUAGCACC - 32
Stem-loop(if miRNA) G    U    A          G       A   ----  A     --   A
 AGAA CUGU AAGCUCAGGA GGAUAGC CCA    UG UACUG  AUG U
 |||| |||| |||||||||| ||||||| |||    || |||||  ||| G
 UCUU GGUA UUCGAGUUCU UCUAUCG GGU    AC AUGAC  UAC U
-    C    C          A       C   UCAA  -     GA   U
Stem-loop sequence GAGAAUCUGUAAAGCUCAGGAGGGAUAGCACCAUGAUACUGAUGAUGUUCAUAGCAGUACAAACUUGGCGCUAUCUAUCUUGAGCUUCAUGGCUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518441.3
ncRNA:21   CCACGAUAGGGAGGACUCGAA   1
  ||||*|||||||||||||=||
targets:942   GGUGGUAUCCCUCCUGAGUUU   962

2.5 PREDICTED: Glycine max leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (LOC100777902), mRNA leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3(LOC100777902) coding protein psRNATarget

Reference

1 PMID:22559273
"Genome organization and characteristics of soybean microRNAs";
Turner M, Yu O, Subramanian S;
BMC Genomics. 13:169(2012).