ncRNA ID | gma-miR390d |
Species | Glycine max |
Class | miRNA |
Genome position | chr2:44954757-44954853 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 12 - AAGCUCAGGAGGGAUAGCACC - 32 |
Stem-loop(if miRNA) |
G    U    A          G       A   ----  A     --   A  AGAA CUGU AAGCUCAGGA GGAUAGC CCA    UG UACUG  AUG U  |||| |||| |||||||||| ||||||| |||    || |||||  ||| G  UCUU GGUA UUCGAGUUCU UCUAUCG GGU    AC AUGAC  UAC U -    C    C          A       C   UCAA  -     GA   U |
Stem-loop sequence | GAGAAUCUGUAAAGCUCAGGAGGGAUAGCACCAUGAUACUGAUGAUGUUCAUAGCAGUACAAACUUGGCGCUAUCUAUCUUGAGCUUCAUGGCUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518441.3 |
|
2.5 | PREDICTED: Glycine max leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (LOC100777902), mRNA | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3(LOC100777902) | coding protein | psRNATarget |
1 | PMID:22559273
"Genome organization and characteristics of soybean microRNAs"; Turner M, Yu O, Subramanian S; BMC Genomics. 13:169(2012). |