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BaseInfo

ncRNA ID	gma-miR5669
Species	Glycine max
Class	miRNA
Genome position	chr2:44915180-44915250 [+]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	11 - CAAUGUAGUGUGGUAAGUGGUC - 32
Stem-loop(if miRNA)	U       A     G   U   GUA     U AGA  GGUGUCA UCAAU UAG GUG   AGUGG C   G  ||||||| ||||| ||| |||   ||||| |   U  UCAUAGU GGUUA AUC CAC   UUAUC G   U G       -     G   -   AGG     U AAC
Stem-loop sequence	UGGUGUCAAUCAAUGUAGUGUGGUAAGUGGUCAGAGUUCAAGUCUAUUGGACACCUAGAUUGGUGAUACUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764168.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||||||| targets:1277   GACCACCUACCACACUACAUUG   1298 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC106795202 (LOC106795202), mRNA	uncharacterized LOC106795202(LOC106795202)	coding protein	psRNATarget
XM_014772523.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:451   GACCACCUACCACACUAUAUUG   472 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106797685 (LOC106797685), mRNA	uncharacterized LOC106797685(LOC106797685)	coding protein	psRNATarget
XM_014779296.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:951   GACCACCUACCACACUAUAUUG   972 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106799792 (LOC106799792), mRNA	uncharacterized LOC106799792(LOC106799792)	coding protein	psRNATarget
XM_014766618.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:220   GACCACCUACCACACUAUAUUG   241 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106795740 (LOC106795740), transcript variant X2, mRNA	uncharacterized LOC106795740(LOC106795740)	coding protein	psRNATarget
XM_014766617.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:219   GACCACCUACCACACUAUAUUG   240 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106795740 (LOC106795740), transcript variant X1, mRNA	uncharacterized LOC106795740(LOC106795740)	coding protein	psRNATarget
XM_014774049.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:273   GACCACCUACCACACUAUAUUG   294 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798121 (LOC106798121), mRNA	uncharacterized LOC106798121(LOC106798121)	coding protein	psRNATarget
XM_014776520.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:939   GACCACCUACCACACUAUAUUG   960 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798933 (LOC106798933), mRNA	uncharacterized LOC106798933(LOC106798933)	coding protein	psRNATarget
XM_014762198.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:933   GACCACCUACCACACUAUAUUG   954 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106794611 (LOC106794611), mRNA	uncharacterized LOC106794611(LOC106794611)	coding protein	psRNATarget
XM_014762093.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:1047   GACCACCUACCACACUAUAUUG   1068 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106794574 (LOC106794574), mRNA	uncharacterized LOC106794574(LOC106794574)	coding protein	psRNATarget
XM_014774577.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:1013   GACCACCUACCACACUAUAUUG   1034 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798386 (LOC106798386), mRNA	uncharacterized LOC106798386(LOC106798386)	coding protein	psRNATarget
XM_014776847.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:1289   GACCACCUACCACACUAUAUUG   1310 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798992 (LOC106798992), transcript variant X3, mRNA	uncharacterized LOC106798992(LOC106798992)	coding protein	psRNATarget
XM_014764207.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:1614   GACCACCUACCACACUAUAUUG   1635 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106795206 (LOC106795206), mRNA	uncharacterized LOC106795206(LOC106795206)	coding protein	psRNATarget
XM_014762313.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:2249   GACCACCUACCACACUAUAUUG   2270 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106794650 (LOC106794650), mRNA	uncharacterized LOC106794650(LOC106794650)	coding protein	psRNATarget
XM_014771454.1	ncRNA:22   CUGGUGAAUGGUGUGAUGUAAC   1   ||||||*||||||||||=|||| targets:2250   GACCACCUACCACACUAUAUUG   2271 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106797229 (LOC106797229), mRNA	uncharacterized LOC106797229(LOC106797229)	coding protein	psRNATarget

Reference

1	PMID:21219599 "Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing"; Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS; BMC Plant Biol. 11:5(2011).