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BaseInfo

ncRNA ID gma-miR319g
Species Glycine max
Class miRNA
Genome position chr2:43885398-43885595 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 164 - UUGGACUGAAGGGAGCUCCUUC - 185
Stem-loop(if miRNA)      -      U            C    C   UU      UAUAAU      UU     G UGAAUUAACUGA       AUACAAUAGUAUUCAAUUAGGGUAA
GGGAA AGAGAG GAAGGAGUUUCC UCAG CCA  CAUGGA      GAAAGA  GGGUU C            UUCAUUC                         U
||||| |||||| |||||||||||| |||| |||  ||||||      ||||||  ||||| |            |||||||                         A
CCCUU UCUUUU CUUCCUCGAGGG AGUC GGU  GUGUCU      CUUUCU  CCCAA G            UUAUAUC                         U
     G      U            A    A   UC      ------      CC     G ------------       UAUGAUAUGAGAGAAGUAAGUGUGU
Stem-loop sequence GGGAAAGAGAGUGAAGGAGUUUCCCUCAGCCCAUUCAUGGAUAUAAUGAAAGAUUGGGUUGCUGAAUUAACUGAUUCAUUCAUACAAUAGUAUUCAAUUAGGGUAAUAUUGUGUGAAUGAAGAGAGUAUAGUAUCUAUAUUGGAACCCCCUCUUUCUCUGUGCUUGGACUGAAGGGAGCUCCUUCUUUUUCUGUUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170935.1
ncRNA:22   CUUCCUCGAGGGAAGUCAGGUU   1
  ||||||||||||||||||||||
targets:11   GAAGGAGCUCCCUUCAGUCCAA   32

0.0 Sequence 8599 from Patent EP2559767 NA coding protein psRNATarget
LQ242604.1
ncRNA:22   CUUCCUCGAGGGAAGUCAGGUU   1
  ||||||||||||||||||||||
targets:11   GAAGGAGCUCCCUUCAGUCCAA   32

0.0 Sequence 8599 from Patent EP2985353 NA coding protein psRNATarget
HI410474.1
ncRNA:22   CUUCCUCGAGGGAAGUCAGGUU   1
  ||||||||||||||||||||||
targets:11   GAAGGAGCUCCCUUCAGUCCAA   32

0.0 Sequence 8599 from Patent EP2074227 NA coding protein psRNATarget
BT098668.1
ncRNA:22   CUUCCUCGAGGGAAGUCAGGUU   1
  ||||||||||||||||||||||
targets:278   GAAGGAGCUCCCUUCAGUCCAA   299

0.0 Soybean clone JCVI-FLGm-12F22 unknown mRNA NA coding protein psRNATarget

Reference

1 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).