Search result

BaseInfo

ncRNA ID gma-miR4368b
Species Glycine max
Class miRNA
Genome position chr2:42950054-42950198 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 2 - AAGGACGGUACUUACGUAAGCAAC - 25
Stem-loop(if miRNA) C         A            A                        ---    G   AA   A    CACA
 AAGGACGGU CUUACGUAAGCA CGUCUUUGAAAGUUCACAAACAAA   GACG UGC  GCA CGUC    A
 ||||||||| |||||||||||| ||||||||||||||||||||||||   |||| |||  ||| ||||
 UUUCUGCCA GAAUGUAUUCGU GCAGAAACUUUCAAGUGUUUGUUU   CUGC ACG  CGU GCAG    A
U         C            C                        AUG    A   AA   G    AAAC
Stem-loop sequence CAAGGACGGUACUUACGUAAGCAACGUCUUUGAAAGUUCACAAACAAAGACGGUGCAAGCAACGUCCACAAACAAAGACGGUGCAAGCAACGUCGUAUUUGUUUGUGAACUUUCAAAGACGCUGCUUAUGUAAGCACCGUCUUUU

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).