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BaseInfo

ncRNA ID gma-miR5377
Species Glycine max
Class miRNA
Genome position chr2:39825520-39825641 [+]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 82 - CUGAAGGAUCGAUGUAGAAUGCU - 104
Stem-loop(if miRNA)                              AA         ---ACAAC  UC      UGU
GACCGUCUUAGAAUGCUCAGCAUUCUGCA  GGUUCUUCA        CG  GUAGAA   U
|||||||||||||||||||||||||||||  |||||||||        ||  ||||||   G
CUGGCAGAAUCUUACGAGUCGUAAGAUGU  CUAGGAAGU        GC  CAUCUU   A
                             AG         CAACACUA  UA      UUG
Stem-loop sequence GACCGUCUUAGAAUGCUCAGCAUUCUGCAAAGGUUCUUCAACAACCGUCGUAGAAUGUUGAGUUUUCUACAUCGAUCACAACUGAAGGAUCGAUGUAGAAUGCUGAGCAUUCUAAGACGGUC

Reference

1 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).