ncRNA ID | gma-miR5032 |
Species | Glycine max |
Class | miRNA |
Genome position | chr2:38369612-38369762 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 68 - AGAGCCACUUUUGGGUUCCCUAU - 90 |
Stem-loop(if miRNA) |
G  --    A GA AGGGAUAUUAAACGAAUGGAAUUAGUAUAUGGAUGUAAUAUAAUGAAAUAGAGCCACUUUUGG  AC  ACCA A  U                                                               G  ||  |||| |  |  CU  AGCU U  C                                                               U A  UG    - -- AAAGGAAGCAUUGAGCAUUUUGAAGAAGUGUCACCGAGGAAAGAUACGGAGUAAAGUAUCCCU |
Stem-loop sequence | GACACCAAAGAUAGGGAUAUUAAACGAAUGGAAUUAGUAUAUGGAUGUAAUAUAAUGAAAUAGAGCCACUUUUGGGUUCCCUAUGAAAUGAGGCAUAGAAAGGAGCCACUGUGAAGAAGUUUUACGAGUUACGAAGGAAACUUCGAGUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094563.1 |
|
0.0 | Soybean clone JCVI-FLGm-14B16 unknown mRNA | NA | coding protein | psRNATarget |
1 | PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011). |