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BaseInfo

ncRNA ID gma-miR5032
Species Glycine max
Class miRNA
Genome position chr2:38369612-38369762 [-]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 68 - AGAGCCACUUUUGGGUUCCCUAU - 90
Stem-loop(if miRNA) G  --    A GA AGGGAUAUUAAACGAAUGGAAUUAGUAUAUGGAUGUAAUAUAAUGAAAUAGAGCCACUUUUGG
 AC  ACCA A  U                                                               G
 ||  |||| |  |
 CU  AGCU U  C                                                               U
A  UG    - -- AAAGGAAGCAUUGAGCAUUUUGAAGAAGUGUCACCGAGGAAAGAUACGGAGUAAAGUAUCCCU
Stem-loop sequence GACACCAAAGAUAGGGAUAUUAAACGAAUGGAAUUAGUAUAUGGAUGUAAUAUAAUGAAAUAGAGCCACUUUUGGGUUCCCUAUGAAAUGAGGCAUAGAAAGGAGCCACUGUGAAGAAGUUUUACGAGUUACGAAGGAAACUUCGAGUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094563.1
ncRNA:23   UAUCCCUUGGGUUUUCACCGAGA   1
  |||||||||||||||||||||||
targets:84   AUAGGGAACCCAAAAGUGGCUCU   106

0.0 Soybean clone JCVI-FLGm-14B16 unknown mRNA NA coding protein psRNATarget

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).