Search result

BaseInfo

ncRNA ID gma-miR1523a
Species Glycine max
Class miRNA
Genome position chr2:12253303-12253397 [-]
Reference genome v1.0
Source miRBase
Length 20
Mature sequence(if miRNA) 66 - AUGGGAUAAAUGUGAGCUCA - 85
Stem-loop(if miRNA) AGGACC    A  GG              ----------     C      UAA
      CAUU UG  AUAAAUGUGAGCUC          AGGAG GAUGAA   A
      |||| ||  ||||||||||||||          ||||| ||||||
      GUAA AC  UAUUUACACUCGAG          UCCUC CUACUU   U
-----A    A  UU              CCCUCAUUAC     A      UCC
Stem-loop sequence AGGACCCAUUAUGGGAUAAAUGUGAGCUCAGGAGCGAUGAAUAAAUCCUUUCAUCACUCCUCAUUACUCCCGAGCUCACAUUUAUUUCAAAAUGA

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).
2 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).